A Computational Scientist's Index of Interesting Resources

Page Title Weblink Category Type
Probabilistic Modelling and Bayesian Inference, Zubin Gharamani http://mlss.tuebingen.mpg.de/2015/slides/ghahramani/lect1bayes.pdf Probabilstic modelling, Machine Learning Slides
High level explanation of Variational Inference https://www.cs.jhu.edu/~jason/tutorials/variational.html Bayesian, Variational Inference Webpage
Variational Autoencoder using an RNN in Keras http://alexadam.ca/ml/2017/05/05/keras-vae.html Variational Autoencoder, RNN, Keras, Python, Code Webpage
Word2Vec and Doc2Vec in Unsupervised Sentiment Analysis of Clinical Discharge Summaries https://arxiv.org/pdf/1805.00352.pdf Word2Vec, Doc2Vec, Sentiment Analysis, NLP Paper
Gaussian Processes and Kernels https://www.inf.ed.ac.uk/teaching/courses/mlpr/2016/notes/w7c_gaussian_process_kernels.pdf Gaussian Processes Notes
Overview of Edward: A probabilitic programming system http://dustintran.com/talks/Tran_Edward.pdf Edward, Probabilstic programming Slides
Edward: Linear Regression http://edwardlib.org/tutorials/supervised-classification Edward, Probabilistic programming Webpage
Gaussian Processes for Machine Learning in Python https://www.inf.ed.ac.uk/teaching/courses/mlpr/2016/notes/w7c_gaussian_process_kernels.pdf Gaussian Processes, Python Webpage
Object Detection with Tensorflow https://3sidedcube.com/guide-retraining-object-detection-models-tensorflow/ Object Detection, Tensorflow Webpage
Configuring the Tensorflow Object Detection Training Pipeline https://github.com/tensorflow/models/blob/master/research/object_detection/g3doc/configuring_jobs.md Object Detection, Tensorflow Webpage
Word2Vec to Doc2Vec: An eaxmple with Gensim https://ireneli.eu/2016/07/27/nlp-05-from-word2vec-to-doc2vec-a-simple-example-with-gensim/ Word2Vec, Doc2Vec, NLP, Gensim Webpage
Why Deep Learning Methods use KL divergence https://digitalcommons.utep.edu/cgi/viewcontent.cgi?article=2188&context=cs_techrep Deep Learning, KL divergence Paper
Functions supported in KateX https://katex.org/docs/supported.html KateX Webpage
Introduction to Graphical Models and Bayesian Networks https://www.cs.ubc.ca/~murphyk/Bayes/bnintro.html Graphical models, Plate notation, Bayesian network Webpage
Implementing a variational autoencoder in Pytorch https://medium.com/@sikdar_sandip/implementing-a-variational-autoencoder-vae-in-pytorch-4029a819ccb6 Variational autoencoder, PyTorch Webpage
Ali Ghodsi Lecture on Variational autoencoder https://www.youtube.com/watch?v=uaaqyVS9-rM Variational autoencoder Youtube video
Jaan.io Variational autoencoder https://jaan.io/publications/ Variational autoencoder Webpage
Jeremy Jordan autoencoder https://www.jeremyjordan.me/autoencoders/ Autoencoder, architecture Webpage
Jeremy Jordan Variational autoencoder https://www.jeremyjordan.me/variational-autoencoders/ Variational autoencoder Webpage
Bernoulli and Binomial distributions https://www.youtube.com/watch?v=7mZksQ24MlI Bernoulli, Binomial, Distributions Youtube video
Dimensionality reduction overview from LLNL https://e-reports-ext.llnl.gov/pdf/240921.pdf Dimensionality reduction, PCA, MDS, ICA, Non linear PCA Report
Overview of Variational inference and comparison to MCMC by Jordan Blei https://arxiv.org/pdf/1601.00670.pdf Variational inference, MCMC, Jordan Blei, Very Readableiew of Variational Inference! Paper
In depth variational autoencoder http://ruishu.io/2018/03/14/vae/ Variational autoencoder Paper
Autoencoder using Tensorflow https://danijar.com/building-variational-auto-encoders-in-tensorflow/ Variational autoencoder, Tensorflow Paper
Machine Learning Conferences https://jackietseng.github.io/conference_call_for_paper/2018-2019-conferences.html Machine Learning, Conference Conference
Conference on Data Mining http://www.guide2research.com/conference/icdm-2019 Data Mining, Conference Conference
Conference on Visual Computing http://www.isvc.net Visual Computing, Conference Conference
Introduction to distributions https://www.datacamp.com/community/tutorials/probability-distributions-python Probability distributions, Python Webpage
Overview of distributions https://onlinelibrary.wiley.com/doi/pdf/10.1002/9781119197096.app03 Probability distributions/td> Book
Neural Architecture Search https://arxiv.org/pdf/1808.05377.pdf NAS, survey/td> paper
Setting up a Jupyter Notebook server https://jupyter-notebook.readthedocs.io/en/stable/public_server.html Jupyter Notebook, server/td> website
Modeling with uncertainty: Machine Learning https://blog.sigopt.com/posts/modeling-with-uncertainty Modeling, uncertainty/td> website
Bayesian optimization https://blog.sigopt.com/posts/bayesian-optimization-with-uncertainty Bayesian optimization/td> website
Hyperparameter optimization https://blog.sigopt.com/posts/evaluating-hyperparameter-optimization-strategies Hyperparameter optimization/td> website
SMAC https://www.cs.ubc.ca/~hutter/papers/10-TR-SMAC.pdf Hyperparameter optimization, Gaussian Process, Bayesian Paper
Overview of Automated Hyperparameter tuning https://indico.cern.ch/event/433556/contributions/1930567/attachments/1231738/1806005/fonarev_hyperparams.pdf Hyperparameter optimization, Overview Paper
Auto-Keras https://arxiv.org/pdf/1806.10282.pdf AutoML, Neural architecture search Paper
Algorithms for hyperparameter optimization http://papers.nips.cc/paper/4443-algorithms-for-hyper-parameter-optimization.pdf Hyperparameter optimization, TPE Paper
Bayesian optimization primer https://app.sigopt.com/static/pdf/SigOpt_Bayesian_Optimization_Primer.pdf Hyperparameter optimization, Overview Paper
Making a Science of Model Search: Hyperparameter Optimization in Hundreds of Dimensions for Vision Architectures http://proceedings.mlr.press/v28/bergstra13.pdf Hyperparameter optimization, Computer Vision Paper
Tree structured Parzen Estimators https://towardsdatascience.com/a-conceptual-explanation-of-bayesian-model-based-hyperparameter-optimization-for-machine-learning-b8172278050f Hyperparameter optimization, TPE website
Overview of Bayesian Optimization https://www.doc.ic.ac.uk/~mpd37/teaching/ml_tutorials/2017-11-08-Archambeau-Bayesian-optimization.pdf Hyperparameter optimization, Overview, Amazon, Reference Slides
Auto-Weka https://arxiv.org/pdf/1208.3719.pdf Hyperparameter optimization, SMAC, TPE Paper
Auto-sklearn https://ml.informatik.uni-freiburg.de/papers/15-NIPS-auto-sklearn-preprint.pdf Hyperparameter optimization, SMAC, Meta-learning Paper
Feature selection https://machinelearningmastery.com/an-introduction-to-feature-selection/ Feature selection website
Tensorflow slides https://www.math.purdue.edu/~nwinovic/slides/Getting_Started_with_TensorFlow_I.pdf_original Tensorflow slides
Greenplum with python pandas and nltk example https://dwhsys.com/2018/05/06/data-mining-in-mpp-database/ Green plum, machine learning blog
Gatsby slides repo https://github.com/fabe/gatsby-starter-deck Gatsby, HTML slides Repository
Deep Gaussian Process for Financial predictions https://medium.com/neuri/being-bayesian-and-thinking-deep-time-series-prediction-with-uncertainty-25ff581b056c Financial time series, Gaussian Process Blog
NLP comparison of ELMO, Bert and ULMFIT https://jalammar.github.io/illustrated-bert/ NLP, BERT, LSTM, ELMO, ULMFIT Blog
Data Science Workflows https://towardsdatascience.com/data-science-project-flow-for-startups-282a93d4508d/ Data Science, Workflow Blog
Evaluation of NLP frameworks https://towardsdatascience.com/paper-summary-evaluation-of-sentence-embeddings-in-downstream-and-linguistic-probing-tasks-5e6a8c63aab1/ NLP, Comparison of frameworks NLP comparison of ELMO, Bert and ULMFIT https://jalammar.github.io/illustrated-bert/ NLP, BERT, LSTM, ELMO, ULMFIT Blog
4 Sequence Encoding Blocks You Must Know Besides RNN/LSTM in Tensorflow https://hanxiao.github.io/2018/06/24/4-Encoding-Blocks-You-Need-to-Know-Besides-LSTM-RNN-in-Tensorflow/ RNN, LSTM Blog
Transfer Learning in NLP for Tweet Stance Classification https://towardsdatascience.com/transfer-learning-in-nlp-for-tweet-stance-classification-8ab014da8dde NLP, ULMFIT Blog
Keras Attention Mechanism https://github.com/philipperemy/keras-attention-mechanism LSTM, GRU Website
How to code The Transformer in Pytorch https://towardsdatascience.com/how-to-code-the-transformer-in-pytorch-24db27c8f9ec RNN, NLP, PyTorch Blog
Complete Guide to spaCy https://nlpforhackers.io/complete-guide-to-spacy/ spaCy,NLP Blog
Use torchtext to Load NLP Datasets https://towardsdatascience.com/use-torchtext-to-load-nlp-datasets-part-i-5da6f1c89d84 PyTorch,NLP Blog
PyTorch Sentiment Analysis https://github.com/bentrevett/pytorch-sentiment-analysis PyTorch,torchtext Blog
How Does Attention Work in Encoder-Decoder Recurrent Neural Networks https://machinelearningmastery.com/how-does-attention-work-in-encoder-decoder-recurrent-neural-networks/ LSTM,RNN Blog
2019 Bloomberg Data Science Research Grant Program https://www.techatbloomberg.com/data-science-research-grant-program-1/ data-science-research-grant-program-1 Website
Call for Reproducibility Workflows https://bids.berkeley.edu/news/call-reproducibility-workflows bids Blog
ODSC Grant Award https://odsc.com/odsc-grant-award odsc-grant-award website
$25 Million in Artificial Intelligence Grants from Google https://www.ictworks.org/artificial-intelligence-grants-google/#.XKzQ2OtKgWp artificial-intelligence-grants-google website
AI GRANT https://aigrant.org/ aigrant website
How to Use t-SNE Effectively https://distill.pub/2016/misread-tsne/ t-SNE website
Bayesian Reasoning and Machine Learning http://web4.cs.ucl.ac.uk/staff/D.Barber/textbook/091117.pdf Bayesian Paper
Advanced NLP with spaCy https://course.spacy.io/chapter1 NLP, spaCy Book
Getting started with PyMC3 https://docs.pymc.io/notebooks/getting_started.html PyMC3 Paper
Getting started with PyMC3 https://docs.pymc.io/notebooks/getting_started.html PyMC3 Paper
Predicting Movie Review Sentiment with BERT on TF Hub https://colab.research.google.com/github/google-research/bert/blob/master/predicting_movie_reviews_with_bert_on_tf_hub.ipynb#scrollTo=dCpvgG0vwXAZ BERT Notebook
Variational inference https://ermongroup.github.io/cs228-notes/inference/variational/Z MCMC Book
The variational auto-encoder https://ermongroup.github.io/cs228-notes/extras/vae/ vae Book
Sampling Methods https://ermongroup.github.io/cs228-notes/inference/sampling/ sampling Book
DOPING: Generative Data Augmentation for Unsupervised Anomaly Detection with GAN https://www.groundai.com/project/doping-generative-data-augmentation-for-unsupervised-anomaly-detection-with-gan/ GAN, DOPING Paper
Text Variational Autoencoder in Keras http://alexadam.ca/ml/2017/05/05/keras-vae.html/ vae, keras-vae blog
VAE-Text-Generation https://github.com/Toni-Antonova/VAE-Text-Generation/blob/master/vae_nlp.ipynb vae, blog
Productionizing NLP Models https://medium.com/modern-nlp/productionizing-nlp-models-9a2b8a0c7d14 NLP blog
Intuitively Understanding Variational Autoencoders https://towardsdatascience.com/intuitively-understanding-variational-autoencoders-1bfe67eb5daf vae,variational-autoencoders blog
Text Variational Autoencoder in Keras http://alexadam.ca/ml/2017/05/05/keras-vae.html vae,Keras blog
VAE-Text-Generation https://github.com/Toni-Antonova/VAE-Text-Generation/blob/master/vae_nlp.ipynb vae blog
Understanding the Deployment Cost of Cloud Computing Services for the Higher Education Institutions https://ieeexplore-ieee-org.ezproxy.lib.vt.edu/document/8939863/keywords cloud computing article
Adversarial Text Generation Without Reinforcement Learning https://arxiv.org/pdf/1810.06640.pdf Generative Adversarial Networks article
Introduction to Kurobako: A Benchmark Tool for Hyperparameter Optimization Algorithms https://tech.preferred.jp/en/blog/kurobako/ Optuna, Algorithms Blog
Nelder-Mead Optimization https://codesachin.wordpress.com/2016/01/16/nelder-mead-optimization/ Dimensions, Optimization Blog
Hyper-parameter optimization algorithms: a short review https://medium.com/criteo-labs/hyper-parameter-optimization-algorithms-2fe447525903 Algorithms, Hyper-parameter Article
Overview on Automatic Tuning of Hyperparameters https://indico.cern.ch/event/433556/contributions/1930567/attachments/1231738/1806005/fonarev_hyperparams.pdf Hyperparameter, Automatic tuning Article
Interpreting Generalized Linear Models https://www.datascienceblog.net/post/machine-learning/interpreting_generalized_linear_models/ Data, GML Article
Generalized Linear Models http://www.stat.columbia.edu/~madigan/W2025/notes/GLM.pdf/ Generalized linear models Article
Name Link Category Type